Gephebase

Gephebase Search Results

This Summary Table shows only the major fields for each entry. If you are interested in other fields (gene synonyms, GO terms, molecular details of the mutation, comments, etc.), please export the .csv file, which contains the complete data for each entry. Please click on a GepheID if you want to see all information regarding a particular entry.

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Summary Table

Your research retrieved 14 results.

Gene	Trait	Mutation	Taxon B	Taxonomic Status	Evidence	Main Reference
Agouti (ASIP)	Coloration	2 Mutations: Coding, SNP	Canis lupus familiaris dog - (subspecies)	Domesticated	Candidate Gene	2 References
GPR22	Coloration	Cis-regulatory, Insertion	Canis lupus familiaris dog - (subspecies) D	Domesticated	Association Mapping	Batcher K; Varney S; Affolter VK ; et al. (2022) An SNN retrocopy insertion upstream of GPR22 is associated with dark red coat color in Poodles.
MFSD12	Coloration	Coding, SNP N	Canis lupus familiaris dog - (subspecies) D	Domesticated	Association Mapping	Hédan B; Cadieu E; Botherel N ; et al. (2019) Identification of a Missense Variant in MFSD12 Involved in Dilution of Phaeomelanin Leading to White[...]
PMEL17	Coloration	6 Mutations: Cis-regulatory, Insertion	Canis lupus familiaris dog - (subspecies) D	Domesticated	Mixed	2 References
SLC45A2=MATP	Coloration	3 Mutations: Coding, N	Canis lupus familiaris dog - (subspecies) D	Domesticated	Candidate Gene	3 References
Agouti (ASIP)	Coloration	Cis-regulatory, Insertion	Canis lupus familiaris dog - (subspecies) D	Domesticated	Candidate Gene	Dreger DL; Schmutz SM (2011 Sep-Oct) A SINE insertion causes the black-and-tan and saddle tan phenotypes in domestic dogs.
FGF3; FGF4; FGF19; ORAOV1	Coloration	Gene Amplification, Complex Change	Canis lupus familiaris dog - (subspecies) D	Domesticated	Linkage Mapping	Salmon Hillbertz NH; Isaksson M; Karlsson EK ; et al. (2007) Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in[...]
Kit	Coloration	Coding, Insertion N	Canis lupus familiaris dog - (subspecies) D	Domesticated	Candidate Gene	Wong AK; Ruhe AL; Robertson KR ; et al. (2013) A de novo mutation in KIT causes white spotting in a subpopulation of German Shepherd dogs.
MC1R	Coloration	5 Mutations:	Canis lupus familiaris dog - (subspecies) D	Domesticated	Mixed	4 References
Melanophilin (MLPH)	Coloration	3 Mutations: Coding,	Canis lupus familiaris dog - (subspecies) D	Domesticated	Mixed	3 References
Microphtalmia-associated transcription factor	Coloration	Cis-regulatory, Deletion	Canis lupus familiaris dog - (subspecies) D	Domesticated	Association Mapping	Karlsson EK; Baranowska I; Wade CM ; et al. (2007) Efficient mapping of mendelian traits in dogs through genome-wide association. 1 Additional References Baranowska Körberg I; Sundström E; Meadows JR (2014) A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs.
PSMB7	Coloration	Coding, SNP	Canis lupus familiaris dog - (subspecies)	Domesticated	Linkage Mapping	Clark LA; Tsai KL; Starr AN ; et al. (2011) A missense mutation in the 20S proteasome β2 subunit of Great Danes having harlequin coat patterning[...]
tyrosinase-related protein 1 (TYRP1)	Coloration	5 Mutations: Coding,	Canis lupus familiaris dog - (subspecies) D	Domesticated	Candidate Gene	3 References
beta-defensin 103 (CBD103)	Coloration	Coding, Deletion	Canis lupus familiaris dog - (subspecies) D Canis latrans coyote - (species) D Canis lupus gray wolf - (species) D	Domesticated	Linkage Mapping	Candille SI; Kaelin CB; Cattanach BM ; et al. (2007) A -defensin mutation causes black coat color in domestic dogs. 2 Additional References Anderson TM; vonHoldt BM; Candille SI (2009) Molecular and evolutionary history of melanism in North American gray wolves. Schweizer RM; Durvasula A; Smith J (2018) Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.