GEPHE SUMMARY
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Gephebase Gene
Entry Status
Published
GepheID
GP00001117
Main curator
Martin
PHENOTYPIC CHANGE
Trait #1
Trait Category
Trait
Trait State in Taxon A
Hordeum vulgare
Trait State in Taxon B
Hordeum vulgare
Trait #2
Trait Category
Trait State in Taxon A
-
Trait State in Taxon B
-
Ancestral State
Data not curated
Taxonomic Status
Taxon A
Latin Name
Common Name
-
Synonyms
barley; Hordeum vulgare L.; Horedum vulgare
Rank
species
Lineage
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yta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Parent
NCBI Taxonomy ID
is Taxon A an Infraspecies?
No
Taxon B
Latin Name
Common Name
-
Synonyms
barley; Hordeum vulgare L.; Horedum vulgare
Rank
species
Lineage
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yta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Parent
NCBI Taxonomy ID
is Taxon B an Infraspecies?
No
GENOTYPIC CHANGE
Generic Gene Name
TB1
Synonyms
tb1; Z178A11.18
String
Sequence Similarities
-
GO - Molecular Function
GO:0003700 : DNA-binding transcription factor activity
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GO - Biological Process
GO:0007275 : multicellular organism development
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GO - Cellular Component
Presumptive Null
Molecular Type
Aberration Type
Molecular Details of the Mutation
Large haplotypes; unknown
Experimental Evidence
Authors
Ramsay L; Comadran J; Druka A; Marshall DF; Thomas WT; Macaulay M; MacKenzie K; Simpson C; et al.
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Abstract
The domestication of cereals has involved common changes in morphological features, such as seed size, seed retention and modification of vegetative and inflorescence architecture that ultimately contributed to an increase in harvested yield. In barley, this process has resulted in two different cultivated types, two-rowed and six-rowed forms, both derived from the wild two-rowed ancestor, with archaeo-botanical evidence indicating the origin of six-rowed barley early in the domestication of the species, some 8,600-8,000 years ago. Variation at SIX-ROWED SPIKE 1 (VRS1) is sufficient to control this phenotype. However, phenotypes imposed by VRS1 alleles are modified by alleles at the INTERMEDIUM-C (INT-C) locus. Here we show that INT-C is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1 (TB1) and identify 17 coding mutations in barley TB1 correlated with lateral spikelet fertility phenotypes.
Additional References
RELATED GEPHE
Related Genes
Related Haplotypes
No matches found.
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