GEPHE SUMMARY
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Gephebase Gene
Entry Status
Published
GepheID
GP00001194
Main curator
Martin
PHENOTYPIC CHANGE
Trait Category
Trait
Trait State in Taxon A
Vitis vinifera - white-skinned cultivar - VvmybA1a allele
Trait State in Taxon B
Vitis vinifera - red-skinned cultivar - VvmybA1b allele
Ancestral State
Taxon A
Taxonomic Status
Taxon A
Latin Name
Common Name
wine grape
Synonyms
Vitis vinifera subsp. vinifera; wine grape; Vitis vinifera L.
Rank
species
Lineage
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tina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Viteae; Vitis
Parent
NCBI Taxonomy ID
is Taxon A an Infraspecies?
No
Taxon B
Latin Name
Common Name
wine grape
Synonyms
Vitis vinifera subsp. vinifera; wine grape; Vitis vinifera L.
Rank
species
Lineage
Show more ...
tina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Viteae; Vitis
Parent
NCBI Taxonomy ID
is Taxon B an Infraspecies?
Yes
Taxon B Description
cv. ‘Ruby Okuyama’ and cv. ‘Flame Muscat’
GENOTYPIC CHANGE
Generic Gene Name
VvmybA1
Synonyms
mybA; MybA3; mybA1; VVMYBA1; VvmybA3; MYBA1; VIT_02s0033g00410
String
Sequence Similarities
-
GO - Molecular Function
GO - Biological Process
-
GO - Cellular Component
Presumptive Null
Molecular Type
Aberration Type
Deletion Size
1-10 kb
Molecular Details of the Mutation
Gret1 retrotransposon deletion; leaving behind its 3'-LTR flanked by 5 bp of a duplicated target site
Experimental Evidence
Authors
Kobayashi S; Goto-Yamamoto N; Hirochika H
Abstract
-
RELATED GEPHE
Related Haplotypes
EXTERNAL LINKS
COMMENTS
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