GEPHE SUMMARY
Print
Gephebase Gene
Entry Status
Published
GepheID
GP00001230
Main curator
Arnoult
PHENOTYPIC CHANGE
Trait #1
Trait Category
Trait
Trait State in Taxon A
Arabidopsis thaliana- Ler0
Trait State in Taxon B
Arabidopsis thaliana- Eri-1
Trait #2
Trait Category
Trait State in Taxon A
-
Trait State in Taxon B
-
Ancestral State
Taxon A
Taxonomic Status
Taxon A
Latin Name
Common Name
thale cress
Synonyms
thale cress; mouse-ear cress; thale-cress; Arabidopsis thaliana (L.) Heynh.; Arabidopsis thaliana (thale cress); Arabidopsis_thaliana; Arbisopsis thaliana; thale kress
Rank
species
Lineage
Show more ...
; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NCBI Taxonomy ID
is Taxon A an Infraspecies?
Yes
Taxon A Description
Arabidopsis thaliana- Ler0
Taxon B
Latin Name
Common Name
thale cress
Synonyms
thale cress; mouse-ear cress; thale-cress; Arabidopsis thaliana (L.) Heynh.; Arabidopsis thaliana (thale cress); Arabidopsis_thaliana; Arbisopsis thaliana; thale kress
Rank
species
Lineage
Show more ...
; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NCBI Taxonomy ID
is Taxon B an Infraspecies?
Yes
Taxon B Description
Arabidopsis thaliana- Eri-1
GENOTYPIC CHANGE
Generic Gene Name
HUA2
Synonyms
ENHANCER OF AG-4 2; MYJ24.14; MYJ24_14; ART1; At5g23150; MKD15
String
Sequence Similarities
-
GO - Molecular Function
GO - Biological Process
GO - Cellular Component
Presumptive Null
Molecular Type
Aberration Type
Molecular Details of the Mutation
Premature stop codon resulting in truncation of 290 C-terminal amino-acids (hua-2-5 Ler allele)
Experimental Evidence
Authors
Ilk N; Ding J; Ihnatowicz A; Koornneef M; Reymond M
Abstract
Growing conditions combining high light intensities and low temperatures lead to anthocyanin accumulation in plants. This response was contrasted between two Arabidopsis thaliana accessions, which were used to decipher the genetic and molecular bases underlying the variation of this response. Quantitative trait loci (QTLs) for flowering time (FT) and anthocyanin accumulation under a high-light and low-temperature scenario versus a control environment were mapped. Major QTLs were confirmed using near-isogenic lines. Candidate genes were examined using mutants and gene expression studies as well as transgenic complementation. Several QTLs were found for FT and for anthocyanin content, of which one QTL co-located at the ENHANCER OF AG-4 2 (HUA2) locus. That HUA2 is a regulator of both pathways was confirmed by the analysis of loss-of-function mutants. For a strong expression of anthocyanin, additional allelic variation was detected for the PRODUCTION OF ANTHOCYANIN PIGMENT1 (PAP1) and PAP2 genes which control the anthocyanin pathway. The genetic control of variation for anthocyanin content was dissected in A. thaliana and shown to be affected by a common regulator of flowering and anthocyanin biosynthesis together with anthocyanin-specific regulators.
© 2014 INRA New Phytologist © 2014 New Phytologist Trust.
© 2014 INRA New Phytologist © 2014 New Phytologist Trust.
Additional References
RELATED GEPHE
Related Haplotypes
EXTERNAL LINKS
COMMENTS
other FT QTLs confirmed in the study ; high-light and low-temperature stress
YOUR FEEDBACK is welcome!