GEPHE SUMMARY Print
Gephebase Gene
Entry Status
Published
GepheID
GP00000179
Main curator
Martin
PHENOTYPIC CHANGE
Trait #1
Trait Category
Trait State in Taxon A
Hordeum vulgare - Nure (winter)
Trait State in Taxon B
Hordeum vulgare - Tremois (spring)
Trait #2
Trait Category
Trait State in Taxon A
-
Trait State in Taxon B
-
Ancestral State
Data not curated
Taxonomic Status
Taxon A
Common Name
-
Synonyms
barley; Hordeum vulgare L.; Horedum vulgare
Rank
species
Lineage
Show more ... yta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
NCBI Taxonomy ID
is Taxon A an Infraspecies?
Yes
Taxon A Description
Hordeum vulgare - Nure (winter)
Taxon B
Common Name
-
Synonyms
barley; Hordeum vulgare L.; Horedum vulgare
Rank
species
Lineage
Show more ... yta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
NCBI Taxonomy ID
is Taxon B an Infraspecies?
Yes
Taxon B Description
Hordeum vulgare - Tremois (spring)
GENOTYPIC CHANGE
Generic Gene Name
CEN
Synonyms
centroradialis; F10A12.20; ATC; At2g27550; F10A12.22; F15K20.35
Sequence Similarities
Belongs to the phosphatidylethanolamine-binding protein family.
GO - Molecular Function
-
UniProtKB
Arabidopsis thaliana
GenebankID or UniProtKB
Presumptive Null
No
Molecular Type
Aberration Type
SNP
SNP Coding Change
Nonsynonymous
Molecular Details of the Mutation
P135A
Experimental Evidence
Taxon A Taxon B Position
Codon - - -
Amino-acid - - -
Authors
Comadran J; Kilian B; Russell J; Ramsay L; Stein N; Ganal M; Shaw P; Bayer M; et al. ... show more
Abstract
As early farming spread from the Fertile Crescent in the Near East around 10,000 years before the present, domesticated crops encountered considerable ecological and environmental change. Spring-sown crops that flowered without the need for an extended period of cold to promote flowering and day length-insensitive crops able to exploit the longer, cooler days of higher latitudes emerged and became established. To investigate the genetic consequences of adaptation to these new environments, we identified signatures of divergent selection in the highly differentiated modern-day spring and winter barleys. In one genetically divergent region, we identify a natural variant of the barley homolog of Antirrhinum CENTRORADIALIS (HvCEN) as a contributor to successful environmental adaptation. The distribution of HvCEN alleles in a large collection of wild and landrace accessions indicates that this involved selection and enrichment of preexisting genetic variants rather than the acquisition of mutations after domestication.
Additional References
EXTERNAL LINKS
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