GEPHE SUMMARY Print
Gephebase Gene
amylase
Entry Status
Published
GepheID
GP00001907
Main curator
Courtier
PHENOTYPIC CHANGE
Trait Category
Physiology
Trait
Starch processing
Trait State in Taxon A
Asian badger
Trait State in Taxon B
Asian badger
Ancestral State
Taxon A
Taxonomic Status
Intraspecific
Taxon A
Latin Name
Meles leucurus
Common Name
Asian badger
Synonyms
Meles meles leucurus; Asian badger; Meles leucurus (Hodgson, 1847)
Rank
species
Lineage
Show more ... stomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Melinae; Meles
Parent
Meles () - (Rank: genus)
NCBI Taxonomy ID
702266
is Taxon A an Infraspecies?
No
Taxon B
Latin Name
Meles leucurus
Common Name
Asian badger
Synonyms
Meles meles leucurus; Asian badger; Meles leucurus (Hodgson, 1847)
Rank
species
Lineage
Show more ... stomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Melinae; Meles
Parent
Meles () - (Rank: genus)
NCBI Taxonomy ID
702266
is Taxon B an Infraspecies?
No
GENOTYPIC CHANGE
Generic Gene Name
Amy1
Synonyms
Amy-1; Amy1a; C030014B17Rik; Amy-1-a
String
10090.ENSMUSP00000070368
Sequence Similarities
Belongs to the glycosyl hydrolase 13 family.
GO - Molecular Function
GO:0004556 : alpha-amylase activity ... show more
GO - Biological Process
GO:0009617 : response to bacterium ... show more
GO - Cellular Component
GO:0005615 : extracellular space
UniProtKB
Mus musculus
P00687
GenebankID or UniProtKB
Presumptive Null
No
Molecular Type
Gene Amplification
Aberration Type
Insertion
Insertion Size
1-10 kb
Molecular Details of the Mutation
Copy Number Variation varies between one and four in this species
Experimental Evidence
Candidate Gene
Main Reference
Variation in pancreatic amylase gene copy number among Eurasian badgers (Carnivora, Mustelidae, Meles) and its relationship to diet . (2019 )
Authors
Abduriyim Shamshidin; Nishita Yoshinori; Abramov AV; Solovyev VA; Saveljev AP; Kosintsev Pavel A; Kryukov Alexey P; Raichev Evgeniy; et al. ... show more
Abstract
-
Additional References
RELATED GEPHE
Related Genes
No matches found.
Related Haplotypes
No matches found.
EXTERNAL LINKS
COMMENTS
@ParallelEvolution in mice; humans; dogs; rats
YOUR FEEDBACK is welcome!