GEPHE SUMMARY
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									Gephebase Gene
					
		
	
									Entry Status
					
		
													Published
					
	
									GepheID
					
		
													GP00002259
					
	
									Main curator
					
		
													Martin
					
	
            		PHENOTYPIC CHANGE
            	            
	                
	
									Trait Category
					
		
	
									Trait State in Taxon A
					
		
													Sensitive
					
	
									Trait State in Taxon B
					
		
													Resistance to avian sarcoma and leukosis viruses subgroup A
					
	
									Ancestral State
					
		
													Taxon A
					
	
									Taxonomic Status
					
		
	Taxon A
					
									Latin Name
					
		
	
									Common Name
					
		
																			chicken
					
	
									Synonyms
					
		
																			Gallus gallus domesticus; chicken; bantam; chickens
					
	
									Rank
					
		
																			species
					
	
		Lineage
	
	
															
				Show more ... 
						pha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
			
			
							Parent
					
		
	
							NCBI Taxonomy ID
					
		
	
									is Taxon A an Infraspecies?
					
		
																													No
					
	Taxon B
					
									Latin Name
					
		
	
									Common Name
					
		
																			chicken
					
	
									Synonyms
					
		
																			Gallus gallus domesticus; chicken; bantam; chickens
					
	
									Rank
					
		
																			species
					
	
		Lineage
	
	
															
				Show more ... 
						pha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
			
			
							Parent
					
		
	
							NCBI Taxonomy ID
					
		
	
									is Taxon B an Infraspecies?
					
		
																													No
					
	
            GENOTYPIC CHANGE
            	            
	                
	
									Generic Gene Name
					
		
																			tva
					
	
									Synonyms
					
		
																				-
					
	
									String
					
		
																				-
					
	
									Sequence Similarities
					
		
																				-
					
	
							GO - Molecular Function
						
						
																											-
	
																					
					
							GO - Biological Process
						
						
																											-
	
																					
					
							GO - Cellular Component
						
						
					
									UniProtKB
																							
Gallus gallus
						
					Gallus gallus
									Presumptive Null
					
		
	
									Molecular Type
					
		
	
									Aberration Type
					
		
	
									Deletion Size
					
		
													1-9 bp
					
	
									Molecular Details of the Mutation
					
		
													c.502_516delCGCTCACCCCGCCCC
					
	
									Experimental Evidence
					
		
	
				Main Reference
	
	
				Authors
	
	
									Chen W; Liu Y; Li H; Chang S; Shu D; Zhang H; Chen F; Xie Q
										
							Abstract
					
		
																			The group of avian sarcoma and leukosis virus (ASLV) in chickens contains six highly related subgroups, A to E and J. Four genetic loci, tva, tvb, tvc and tvj, encode for corresponding receptors that determine the susceptibility to the ASLV subgroups. The prevalence of ASLV in hosts may have imposed strong selection pressure toward resistance to ASLV infection, and the resistant alleles in all four receptor genes have been identified. In this study, two new alleles of the tva receptor gene, tva(r5) and tva(r6), with similar intronic deletions were identified in Chinese commercial broilers. These natural mutations delete the deduced branch point signal within the first intron, disrupting mRNA splicing of the tva receptor gene and leading to the retention of intron 1 and introduction of premature TGA stop codons in both the longer and shorter tva isoforms. As a result, decreased susceptibility to subgroup A ASLV in vitro and in vivo was observed in the subsequent analysis. In addition, we identified two groups of heterozygous allele pairs which exhibited quantitative differences in host susceptibility to ASLV-A. This study demonstrated that defective splicing of the tva receptor gene can confer genetic resistance to ASLV subgroup A in the host. 
					
	
				Additional References
	
	
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								Related Haplotypes
					
					
				
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					@AllelicSeries https://omia.org/OMIA001299/9031/
				
			
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