GEPHE SUMMARY
Print
Gephebase Gene
Entry Status
Published
GepheID
GP00002435
Main curator
Courtier
PHENOTYPIC CHANGE
Trait Category
Trait State in Taxon A
tomato leafminer Tuta absoluta - susceptible
Trait State in Taxon B
tomato leafminer Tuta absoluta - Brazilian resistant strain BR-GML1
Ancestral State
Taxon A
Taxonomic Status
Taxon A
Latin Name
Common Name
-
Synonyms
Gnorimoschema absoluta; Phthorimaea absoluta; Scrobipalpula absoluta; Scrobipalpuloides absoluta; Tuta absoluta (Meyrick, 1917)
Rank
species
Lineage
Show more ...
rustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Amphiesmenoptera; Lepidoptera; Glossata; Neolepidoptera; Heteroneura; Ditrysia; Gelechioidea; Gelechiidae; Gelechiinae; Tuta
Parent
NCBI Taxonomy ID
is Taxon A an Infraspecies?
No
Taxon B
Latin Name
Common Name
-
Synonyms
Gnorimoschema absoluta; Phthorimaea absoluta; Scrobipalpula absoluta; Scrobipalpuloides absoluta; Tuta absoluta (Meyrick, 1917)
Rank
species
Lineage
Show more ...
rustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Amphiesmenoptera; Lepidoptera; Glossata; Neolepidoptera; Heteroneura; Ditrysia; Gelechioidea; Gelechiidae; Gelechiinae; Tuta
Parent
NCBI Taxonomy ID
is Taxon B an Infraspecies?
No
GENOTYPIC CHANGE
Generic Gene Name
RyR
Synonyms
Ryr; CG10844; D-RyR; Dmel\CG10844; DmRyR; DRR; dry; DRY; dRyr; dRyR; dya; l(2)k00424; l(2)k04913; Rya-44F; Rya-r4; rya-r44F; Rya-r44F; Rya-R44F; Rya-r76CD; ryr; RYR; RyRs
String
Sequence Similarities
Belongs to the ryanodine receptor (TC 1.A.3.1) family.
GO - Molecular Function
GO:0005509 : calcium ion binding
... show more
GO - Biological Process
GO:0006874 : cellular calcium ion homeostasis
... show more
GO - Cellular Component
GO:0016021 : integral component of membrane
... show more
UniProtKB
Drosophila melanogaster
Drosophila melanogaster
Presumptive Null
Molecular Type
Aberration Type
SNP Coding Change
Nonsynonymous
Molecular Details of the Mutation
G4903 corresponds to the G4946E mutation site shown to confer diamide resistance in diamondback moth
Experimental Evidence
Taxon A | Taxon B | Position | |
---|---|---|---|
Codon | GGG | GAA | - |
Amino-acid | Gly | Glu | 4946 |
Authors
Roditakis E; Steinbach D; Moritz G; Vasakis E; Stavrakaki M; Ilias A; García-Vidal L; Martínez-Aguirre MDR; et al.
... show more
Abstract
Insect ryanodine receptors (RyR) are the molecular target-site for the recently introduced diamide insecticides. Diamides are particularly active on Lepidoptera pests, including tomato leafminer, Tuta absoluta (Lepidoptera: Gelechiidae). High levels of diamide resistance were recently described in some European populations of T. absoluta, however, the mechanisms of resistance remained unknown. In this study the molecular basis of diamide resistance was investigated in a diamide resistant strain from Italy (IT-GELA-SD4), and additional resistant field populations collected in Greece, Spain and Brazil. The genetics of resistance was investigated by reciprocally crossing strain IT-GELA-SD4 with a susceptible strain and revealed an autosomal incompletely recessive mode of inheritance. To investigate the possible role of target-site mutations as known from diamondback moth (Plutella xylostella), we sequenced respective domains of the RyR gene of T. absoluta. Genotyping of individuals of IT-GELA-SD4 and field-collected strains showing different levels of diamide resistance revealed the presence of G4903E and I4746M RyR target-site mutations. These amino acid substitutions correspond to those recently described for diamide resistant diamondback moth, i.e. G4946E and I4790M. We also detected two novel mutations, G4903V and I4746T, in some of the resistant T. absoluta strains. Radioligand binding studies with thoracic membrane preparations of the IT-GELA-SD4 strain provided functional evidence that these mutations alter the affinity of the RyR to diamides. In combination with previous work on P. xylostella our study highlights the importance of position G4903 (G4946 in P. xylostella) of the insect RyR in defining sensitivity to diamides. The discovery of diamide resistance mutations in T. absoluta populations of diverse geographic origin has serious implications for the efficacy of diamides under applied conditions. The implementation of appropriate resistance management strategies is strongly advised to delay the further spread of resistance.
Copyright © 2016 Elsevier Ltd. All rights reserved.
Copyright © 2016 Elsevier Ltd. All rights reserved.
RELATED GEPHE
Related Genes
Related Haplotypes
EXTERNAL LINKS
COMMENTS
@Parallelism - independent evolution of the same amino acid substitution (but different codon changes GGG>GAG and GGG>GAA) in different Brazilian Tuta absoluta field strains - @TwoNucleotideChangesInSameCodon
YOUR FEEDBACK is welcome!