GEPHE SUMMARY
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Gephebase Gene
Entry Status
Published
GepheID
GP00000768
Main curator
Martin
PHENOTYPIC CHANGE
Trait Category
Trait State in Taxon A
Other rodents
Trait State in Taxon B
Sciurus carolinensis
Ancestral State
Data not curated
Taxonomic Status
Taxon A
Latin Name
Common Name
rodent
Synonyms
rodent
Rank
order
Lineage
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a; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires
NCBI Taxonomy ID
is Taxon A an Infraspecies?
No
Taxon B
Latin Name
Common Name
gray squirrel
Synonyms
gray squirrel; eastern gray squirrel; Sciurus carolinensis Gmelin, 1788; Sciurus carolinensus
Rank
species
Lineage
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eleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Parent
NCBI Taxonomy ID
is Taxon B an Infraspecies?
No
GENOTYPIC CHANGE
Generic Gene Name
OPN1SW
Synonyms
BCP; BOP; CBT
String
Sequence Similarities
Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
GO - Molecular Function
GO:0038023 : signaling receptor activity
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GO - Biological Process
GO:0007165 : signal transduction
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GO - Cellular Component
GO:0005887 : integral component of plasma membrane
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Presumptive Null
Molecular Type
Aberration Type
SNP Coding Change
Nonsynonymous
Molecular Details of the Mutation
F86Y
Experimental Evidence
| Taxon A | Taxon B | Position | |
|---|---|---|---|
| Codon | - | - | - |
| Amino-acid | - | - | - |
Main Reference
Authors
Carvalho Ldos S; Cowing JA; Wilkie SE; Bowmaker JK; Hunt DM
Abstract
-
Additional References
RELATED GEPHE
Related Genes
No matches found.
Related Haplotypes
EXTERNAL LINKS
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