GEPHE SUMMARY
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									Gephebase Gene
					
		
	
									Entry Status
					
		
													Published
					
	
									GepheID
					
		
													GP00000981
					
	
									Main curator
					
		
													Martin
					
	
            		PHENOTYPIC CHANGE
            	            
	                
	
									Trait Category
					
		
	
									Trait State in Taxon A
					
		
													Tribolium castaneum
					
	
									Trait State in Taxon B
					
		
													Tribolium castaneum - resistant
					
	
									Ancestral State
					
		
													Data not curated
					
	
									Taxonomic Status
					
		
	Taxon A
					
									Latin Name
					
		
	
									Common Name
					
		
																			red flour beetle
					
	
									Synonyms
					
		
																			red flour beetle; rust-red flour beetle; Tribolium castaneum (Herbst, 1797)
					
	
									Rank
					
		
																			species
					
	
		Lineage
	
	
															
				Show more ... 
						Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
			
			
							Parent
					
		
	
							NCBI Taxonomy ID
					
		
	
									is Taxon A an Infraspecies?
					
		
																													No
					
	Taxon B
					
									Latin Name
					
		
	
									Common Name
					
		
																			red flour beetle
					
	
									Synonyms
					
		
																			red flour beetle; rust-red flour beetle; Tribolium castaneum (Herbst, 1797)
					
	
									Rank
					
		
																			species
					
	
		Lineage
	
	
															
				Show more ... 
						Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
			
			
							Parent
					
		
	
							NCBI Taxonomy ID
					
		
	
									is Taxon B an Infraspecies?
					
		
																													No
					
	
            GENOTYPIC CHANGE
            	            
	                
	
									Generic Gene Name
					
		
																			Rdl
					
	
									Synonyms
					
		
																			CG10537; CT29555; Dmel\CG10537; DmRdl; DmRDL; gaba; GABA; GABA-R; GABAr; GABA[[A]]; GABA[[A]] receptor; GABA[[A]]-R; GABA[[A]]R; LCCH1; Rd1; rdl; RDL
					
	
									String
					
		
	
									Sequence Similarities
					
		
																			Belongs to the ligand-gated ion channel (TC 1.A.9) family. Gamma-aminobutyric acid receptor (TC 1.A.9.5) subfamily.
					
	
							GO - Molecular Function
						
						
																														GO:0004890 : GABA-A receptor activity
							
									 ... show more
										
																					
					
							GO - Biological Process
						
						
																														GO:0007165 : signal transduction
							
									 ... show more
										
																					
					
							GO - Cellular Component
						
						
																														GO:0016021 : integral component of membrane
							
									 ... show more
										
																					
					
									Presumptive Null
					
		
	
									Molecular Type
					
		
	
									Aberration Type
					
		
	
									SNP Coding Change
					
		
													Nonsynonymous
					
	
									Molecular Details of the Mutation
					
		
													Ala302Ser
					
	
									Experimental Evidence
					
		
	| Taxon A | Taxon B | Position | |
|---|---|---|---|
| Codon | - | - | - | 
| Amino-acid | - | - | - | 
				Main Reference
	
	
				Authors
	
	
									Miyazaki M; Matsumura F; Beeman RW
										
							Abstract
					
		
																			Using polymerase chain reactions (PCR) on cDNA, the DNA sequence of a membrane spanning region of a GABA receptor of the red flour beetle, Tribolium castaneum was identified. The deduced amino acid sequence indicates that its basic structure is similar to the GABA receptor of Rdl type subunits of Drosophila melanogaster and of Blattella germanica. Particularly conserved are M1, M2 and M3 segments. Within this 146 amino acid stretch, the GABA receptor from the red flour beetle differed from corresponding ones from Drosophila and Rdl subunit of B. germanica by 12 and eight amino acids, respectively. By using an identical approach, the corresponding DNA region was sequenced from the cDNA of a cyclodiene-resistant strain of T. castaneum. While two points of mutation were found only one mutation in DNA was found to result in an amino acid shift. The site of mutation was at the 5th amino acid of the M2 cylinder where G to T conversion of the GCT codon resulted in a conversion of alanine to serine. This is qualitatively the same mutational switch of alanine to serine in resistant strains previously reported to have occurred in cyclodiene-resistant Drosophila melanogaster, Aedes aegypti and Blattella germanica, indicating that this amino acid change is the likely cause for evolution of the nerve insensitive type of resistance to cyclodiene insecticides.
					
	
            RELATED GEPHE
        
	
					   		Related Genes
					
					
													No matches found.
											
				
								Related Haplotypes
					
					
													No matches found.
											
				
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