Gephebase

Gephebase Search Results

This Summary Table shows only the major fields for each entry. If you are interested in other fields (gene synonyms, GO terms, molecular details of the mutation, comments, etc.), please export the .csv file, which contains the complete data for each entry. Please click on a GepheID if you want to see all information regarding a particular entry.

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Your research retrieved 3 results.

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Gene	Trait	Mutation	Taxon B	Taxonomic Status	Evidence	Main Reference	Gephe ID	UniProtKB	Trait Category	Mutation Details	Taxon A	Taxon B	Edit Gene-GePhe	Taxon B	Status
ndp (norrin)	Coloration (plumage)	Cis-regulatory, Insertion	Corvus cornix hooded crow - (species) D	Intraspecific	Association Mapping	Knief U; Bossu CM; Saino N ; et al. (2019) Epistatic mutations under divergent selection govern phenotypic variation in the crow hybrid zone. 2 Additional References Poelstra JW; Vijay N; Hoeppner MP (2015) Transcriptomics of colour patterning and coloration shifts in crows. Weissensteiner MH; Bunikis I; Catalán A (2020) Discovery and population genomics of structural variation in a songbird genus.	GP00002148	Ndp P48744	Morphology	2.25-kb LTR retrotransposon insertion reducing expression of the NDP gene and candidate gene LRP6 and a large LD haplotype in chr.18 also show a signal	Corvus corone corone (subspecies)	Corvus cornix hooded crow - (species) D	ndp (norrin)	Corvus cornix hooded crow - (species)	Published - Accepted by Curator
ndp (norrin)	Coloration (plumage)	Coding, SNP N	Columba livia rock pigeon - (species) D	Domesticated	Association Mapping	Vickrey AI; Bruders R; Kronenberg Z ; et al. (2018) Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity i[...]	GP00002250	Ndp P48744	Morphology	Start-codon change predicted to truncate the amino terminus of the NDP protein by 11 amino acids thereby disrupting the 24-amino acid signal peptide sequence N	Columba livia rock pigeon - (species)	Columba livia rock pigeon - (species) D	ndp (norrin)	Columba livia rock pigeon - (species)	Published - Accepted by Curator
ndp (norrin)	Coloration (plumage)	Cis-regulatory, Insertion N	Columba livia rock pigeon - (species) D Columba guinea speckled pigeon - (species) D	Intraspecific	Association Mapping	Vickrey AI; Bruders R; Kronenberg Z ; et al. (2018) Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity i[...]	GP00002251	Ndp P48744	Morphology	CNV driven by tandem repeats with one (bar) two (checker) or four (T-checker) copies per chromosome between approximative positions 1790000 and 1805600 N	Columba livia rock pigeon - (species)	Columba livia rock pigeon - (species) D Columba guinea speckled pigeon - (species) D	ndp (norrin)	Columba livia rock pigeon - (species) Columba guinea speckled pigeon - (species)	Published - Accepted by Curator