Gephebase

Gephebase Search Results

This Summary Table shows only the major fields for each entry. If you are interested in other fields (gene synonyms, GO terms, molecular details of the mutation, comments, etc.), please export the .csv file, which contains the complete data for each entry. Please click on a GepheID if you want to see all information regarding a particular entry.

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Your research retrieved 9 results.

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Gene	Trait	Mutation	Taxon B	Taxonomic Status	Evidence	Main Reference	Gephe ID	UniProtKB	Trait Category	Mutation Details	Taxon A	Taxon B	Edit Gene-GePhe	Taxon B	Status
Abdominal-B	Coloration (abdomen; male)	Cis-regulatory, Unknown	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Liu Y; Ramos-Womack M; Han C ; et al. (2019) Changes throughout a Genetic Network Mask the Contribution of Hox Gene Evolution.	GP00002021	Abd-B P09087	Morphology	change in the iab5 cis-regulatory element (15kb long)- exact causing mutation(s) unknown - decreased AbdB abdominal expression	Drosophila yakuba (species)	Drosophila santomea (species) D	Abdominal-B	Drosophila santomea (species)	Published - Accepted by Curator
achaete-scute complex	Bristle number (genitalia; leg sex comb)	3 Mutations: Cis-regulatory SNP	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Nagy O; Nuez I; Savisaar R ; et al. (2018) Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change.	GP00001680	sc P10084	Morphology	3 mutations	Drosophila yakuba (species)	Drosophila santomea (species) D	achaete-scute complex	Drosophila santomea (species)	Published - Accepted by Curator
alcohol dehydrogenase (Adh)	Xenobiotic resistance (alcohol)	4 Mutations:	Drosophila yakuba (species)	Interspecific	Candidate Gene	Loehlin DW; Ames JR; Vaccaro K ; et al. (2019) A major role for noncoding regulatory mutations in the evolution of enzyme activity.	GP00001963	Adh P00334	Physiology	4 mutations	Drosophila santomea (species)	Drosophila yakuba (species)	alcohol dehydrogenase (Adh)	Drosophila yakuba (species)	Published - Accepted by Curator
ebony	Coloration (abdomen; male)	Cis-regulatory, Insertion	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Liu Y; Ramos-Womack M; Han C ; et al. (2019) Changes throughout a Genetic Network Mask the Contribution of Hox Gene Evolution.	GP00002024	e O76858	Morphology	insertion of a partial 481 bp fragment related to a transposable element of the helitron class - maybe other causing mutations as well at this ebony locus (including one fixed amino acid change whose phenotypic effect has not been investigated) - increased expression associated with lighter pigmentation	Drosophila yakuba (species)	Drosophila santomea (species) D	ebony	Drosophila santomea (species)	Published - Accepted by Curator
pdm3	Coloration (abdomen; male)	Cis-regulatory, Unknown	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Liu Y; Ramos-Womack M; Han C ; et al. (2019) Changes throughout a Genetic Network Mask the Contribution of Hox Gene Evolution.	GP00002022	pdm3 A0A0B4LEG2	Morphology	change in a cis-regulatory region - exact causing mutation(s) unknown - increased pdm3 abdominal expression associated with lighter color	Drosophila yakuba (species)	Drosophila santomea (species) D	pdm3	Drosophila santomea (species)	Published - Accepted by Curator
tan	Coloration (abdomen; male)	2 Mutations: Cis-regulatory SNP	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Jeong S; Rebeiz M; Andolfatto P ; et al. (2008) The evolution of gene regulation underlies a morphological difference between two Drosophila sister [...] 1 Additional References Rebeiz M; Ramos-Womack M; Jeong S (2009) Evolution of the tan locus contributed to pigment loss in Drosophila santomea: a response to Matute [...]	GP00001099	t Q9W369	Morphology	2 mutations	Drosophila yakuba (species)	Drosophila santomea (species) D	tan	Drosophila santomea (species)	Published - Accepted by Curator
tan	Coloration (abdomen; male)	Cis-regulatory, Deletion	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Jeong S; Rebeiz M; Andolfatto P ; et al. (2008) The evolution of gene regulation underlies a morphological difference between two Drosophila sister [...] 1 Additional References Rebeiz M; Ramos-Womack M; Jeong S (2009) Evolution of the tan locus contributed to pigment loss in Drosophila santomea: a response to Matute [...]	GP00001100	t Q9W369	Morphology	san MSE del30 (30bp deletion)	Drosophila yakuba (species)	Drosophila santomea (species) D	tan	Drosophila santomea (species)	Published - Accepted by Curator
tan	Coloration (abdomen; male)	Cis-regulatory, Deletion	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Jeong S; Rebeiz M; Andolfatto P ; et al. (2008) The evolution of gene regulation underlies a morphological difference between two Drosophila sister [...] 1 Additional References Rebeiz M; Ramos-Womack M; Jeong S (2009) Evolution of the tan locus contributed to pigment loss in Drosophila santomea: a response to Matute [...]	GP00001101	t Q9W369	Morphology	san MSE del212 (212bp deletion)	Drosophila yakuba (species)	Drosophila santomea (species) D	tan	Drosophila santomea (species)	Published - Accepted by Curator
yellow	Coloration (abdomen; male)	Cis-regulatory, Unknown	Drosophila santomea (species) D	Interspecific	Linkage Mapping	Liu Y; Ramos-Womack M; Han C ; et al. (2019) Changes throughout a Genetic Network Mask the Contribution of Hox Gene Evolution.	GP00002023	y P09957	Morphology	change in a cis-regulatory region - exact causing mutation(s) unknown - decreased yellow abdominal expression associated with lighter color	Drosophila yakuba (species)	Drosophila santomea (species) D	yellow	Drosophila santomea (species)	Published - Accepted by Curator