Gephebase

Gephebase Search Results

This Summary Table shows only the major fields for each entry. If you are interested in other fields (gene synonyms, GO terms, molecular details of the mutation, comments, etc.), please export the .csv file, which contains the complete data for each entry. Please click on a GepheID if you want to see all information regarding a particular entry.

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Your research retrieved 12 results.

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Gene	Trait	Mutation	Taxon B	Taxonomic Status	Evidence	Main Reference	Gephe ID	UniProtKB	Trait Category	Mutation Details	Taxon A	Taxon B	Edit Gene-GePhe	Taxon B	Status
ephrin-a4	Coloration (scales)	Unknown, Unknown	Tropheops sp. 'red cheek' (species)	Interspecific	Linkage Mapping	Albertson RC; Powder KE; Hu Y ; et al. (2014) Genetic basis of continuous variation in the levels and modular inheritance of pigmentation in cichl[...]	GP00001420	EFNA4 P52798	Morphology	unknown	Labeotropheus fuelleborni blue mbuna - (species)	Tropheops sp. 'red cheek' (species)	ephrin-a4	Tropheops sp. 'red cheek' (species)	Published - Accepted by Curator
MC1R	Coloration (scales)	Coding, SNP	Aspidoscelis inornatus Little striped whiptail - (species)	Intraspecific	Candidate Gene	Rosenblum EB; Hoekstra HE; Nachman MW (2004) Adaptive reptile color variation and the evolution of the Mc1r gene. 1 Additional References Rosenblum EB; Römpler H; Schöneberg T (2010) Molecular and functional basis of phenotypic convergence in white lizards at White Sands.	GP00000627	MC1R Q01726	Morphology	I170T	Aspidoscelis inornatus Little striped whiptail - (species)	Aspidoscelis inornatus Little striped whiptail - (species)	MC1R	Aspidoscelis inornatus Little striped whiptail - (species)	Published - Accepted by Curator
MC1R	Coloration (scales)	Coding, SNP	Holbrookia maculata lesser earless lizard - (species)	Intraspecific	Candidate Gene	Rosenblum EB; Hoekstra HE; Nachman MW (2004) Adaptive reptile color variation and the evolution of the Mc1r gene. 1 Additional References Rosenblum EB; Römpler H; Schöneberg T (2010) Molecular and functional basis of phenotypic convergence in white lizards at White Sands.	GP00000628	MC1R Q01726	Morphology	V168I; but failed functional validation in Rosenblum et al. 2010	Holbrookia maculata lesser earless lizard - (species)	Holbrookia maculata lesser earless lizard - (species)	MC1R	Holbrookia maculata lesser earless lizard - (species)	Published - Accepted by Curator
MC1R	Coloration (scales)	Coding, SNP	Sceloporus undulatus fence lizard - (species)	Intraspecific	Candidate Gene	Rosenblum EB; Römpler H; Schöneberg T ; et al. (2010) Molecular and functional basis of phenotypic convergence in white lizards at White Sands.	GP00000629	MC1R Q01726	Morphology	H208Y	Sceloporus undulatus fence lizard - (species)	Sceloporus undulatus fence lizard - (species)	MC1R	Sceloporus undulatus fence lizard - (species)	Published - Accepted by Curator
pax3a	Coloration (scales)	Cis-regulatory, SNP	Tropheops sp. 'red cheek' (species)	Interspecific	Linkage Mapping	Albertson RC; Powder KE; Hu Y ; et al. (2014) Genetic basis of continuous variation in the levels and modular inheritance of pigmentation in cichl[...]	GP00001417	pax3a Q6DHA7	Morphology	C>T SNP within 5UTR	Labeotropheus fuelleborni blue mbuna - (species)	Tropheops sp. 'red cheek' (species)	pax3a	Tropheops sp. 'red cheek' (species)	Published - Accepted by Curator
pax3b	Coloration (scales)	Unknown, Unknown	Tropheops sp. 'red cheek' (species)	Interspecific	Linkage Mapping	Albertson RC; Powder KE; Hu Y ; et al. (2014) Genetic basis of continuous variation in the levels and modular inheritance of pigmentation in cichl[...]	GP00001419	pax3-b Q0IH87	Morphology	unknown	Labeotropheus fuelleborni blue mbuna - (species)	Tropheops sp. 'red cheek' (species)	pax3b	Tropheops sp. 'red cheek' (species)	Published - Accepted by Curator
Pax7	Coloration (scales)	Cis-regulatory, Unknown	Maylandia zebra zebra mbuna - (species)	Interspecific	Linkage Mapping	Roberts RB; Ser JR; Kocher TD (2009) Sexual conflict resolved by invasion of a novel sex determiner in Lake Malawi cichlid fishes.	GP00000857	Pax7 P47239	Morphology	Not identified	Labeotropheus fuelleborni blue mbuna - (species)	Maylandia zebra zebra mbuna - (species)	Pax7	Maylandia zebra zebra mbuna - (species)	Published - Accepted by Curator
pax7a	Coloration (scales)	Cis-regulatory, Unknown	Labeotropheus trewavasae (species)	Intraspecific	Candidate Gene	Roberts RB; Moore EC; Kocher TD (2017) An allelic series at pax7a is associated with colour polymorphism diversity in Lake Malawi cichlid f[...]	GP00001422	Pax7 P47239	Morphology	unknown	Labeotropheus trewavasae (species)	Labeotropheus trewavasae (species)	pax7a	Labeotropheus trewavasae (species)	Published - Accepted by Curator
pax7a	Coloration (scales)	Cis-regulatory, Unknown	Labeotropheus trewavasae (species)	Intraspecific	Candidate Gene	Roberts RB; Moore EC; Kocher TD (2017) An allelic series at pax7a is associated with colour polymorphism diversity in Lake Malawi cichlid f[...]	GP00001423	Pax7 P47239	Morphology	unknown	Labeotropheus trewavasae (species)	Labeotropheus trewavasae (species)	pax7a	Labeotropheus trewavasae (species)	Published - Accepted by Curator
pax7a	Coloration (scales)	Cis-regulatory, Unknown	Labeotropheus trewavasae (species)	Intraspecific	Candidate Gene	Roberts RB; Moore EC; Kocher TD (2017) An allelic series at pax7a is associated with colour polymorphism diversity in Lake Malawi cichlid f[...]	GP00001424	Pax7 P47239	Morphology	unknown	Labeotropheus trewavasae (species)	Labeotropheus trewavasae (species)	pax7a	Labeotropheus trewavasae (species)	Published - Accepted by Curator
prolyl endopeptidase (PREP)	Coloration (scales)	Cis-regulatory, Unknown	Uta stansburiana (species) D	Intraspecific	Association Mapping	Corl A; Bi K; Luke C ; et al. (2018) The Genetic Basis of Adaptation following Plastic Changes in Coloration in a Novel Environment.	GP00002108	PREP P48147	Morphology	no coding mutation associated with the phenotype - 2 differentiated SNPs in introns and one is a synonymous change.	Uta stansburiana (species)	Uta stansburiana (species) D	prolyl endopeptidase (PREP)	Uta stansburiana (species)	Published - Accepted by Curator
protein kinase cAMP-dependent type I regulatory subunit alpha (PRKAR1A)	Coloration (scales)	Cis-regulatory, Unknown	Uta stansburiana (species) D	Intraspecific	Association Mapping	Corl A; Bi K; Luke C ; et al. (2018) The Genetic Basis of Adaptation following Plastic Changes in Coloration in a Novel Environment.	GP00002109	Prkar1a Q9DBC7	Morphology	no coding mutation associated with the phenotype - one differentiated SNP in an intron in the 5' UTR	Uta stansburiana (species)	Uta stansburiana (species) D	protein kinase cAMP-dependent type I regulatory subunit alpha (PRKAR1A)	Uta stansburiana (species)	Published - Accepted by Curator